Show the SIM traces

Plot all SIM trace, including optional line to show where the compound elutes.

plot_sims(
  sim_data,
  rt_line = NULL,
  title = NULL,
  subtitle = NULL,
  peak_data = NULL
)

Arguments

sim_data

Data frame containing all the SIMs. Needs three columns: rt = retention time (x), intensity = intensity (y), sim = factor with the SIM names (used for faceting)
rt_line

A numerical value. If not NULL a dashed line is shown at this position.
title

Title of the plot (character).
subtitle

Subtitle of the plot (character).
peak_data

data frame containing all peak data. Output from find_peaks().

Value

A ggplot2 showing all the SIM traces.

Author

Rico Derks